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Jonathan Eisen's Lab

All microbes, all the time. May the microbes be ever in your favor.

  • Home
  • About
    • Jonathan Eisen Bio
    • J. Eisen CV 2023
    • Orcid
    • Disclosures
    • Funding
    • Questions for Jonathan Eisen (Advice, Background, Projects, etc)
    • More About Jonathan Eisen
  • People
    • Eisen Lab Personnel
  • Major research areas
  • Projects
    • Seagrass Microbiomes
  • Past Projects
    • Istmobiome
    • microBEnet
    • Genomic Encyclopedia of Bacteria and Archaea (GEBA)
    • Corn Microbiome
  • Publications
    • Eisen Publications
    • Eisen Pubs on Google Scholar
    • Eisen Publications Organized By Topic Areas
    • Publications Table
    • Publications List w/ notes (from 2018)
    • Evolution Textbook
  • Social Media and Regular Media
    • Eisen Lab Blog
    • Eisen’s Tree of Life Blog
    • Press Coverage
    • LinkedIn
    • Instagram
    • Threads
    • microBEnet Blog
    • Twitter
  • Education/Outreach
    • Eisen Talks and Presentations
    • Jonathan Eisen’s TED Talk on “Meet Your Microbes”
    • Jonathan Eisen Talks on Youtube
    • Eisen talks on Slideshare
    • Gut Check: The Microbiome Game
  • Products
    • Software
      • A5 Assembly Pipeline
      • AMPHORA
      • APIS
      • Biotorrents
      • ComboDB
      • CompostBin
      • Mauve Assembly Metrics
      • PhyloSift
      • phylOTU
      • Pique
      • STAP
      • OTU Hunter
      • WATERS
      • Zorro
    • Lab Data
      • Lab Sequence Data
      • Eisen Lab Data at Figshare
      • Sifting Families: SFams
      • Darwin’s Finch Genome Data at Figshare
      • Data from Morgan et al. metagenomic simulation
      • Haloarchaea Data from Lynch et al. 2012
      • Data from Wu et al. 2011 Stalking 4th Domain paper
    • Other
      • 16S PCR Protocol
      • Gut Check: The Microbiome Game
      • Jonathan Eisen’s Figshare
  • Misc.
    • iNaturalist
    • Photography
    • Retroblogging Meetings and Seminars: Posting Scans of Notes
    • Miscellaneous Notes and Scans
Jonathan Eisen's Lab

Microbiology Communication and Participation

Details coming soon.

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Lastest Instagram Posts by Jonathan Eisen
Osprey at the Seattle Waterfront View from the deck of the Bell Harbor Conference Center in Seattle where I attended #sageassembly yesterday Sign caption contest Found the perfect pizza to get in San Francisco for someone from #YoloCounty - at @joyride.pizza Had a really nice time at a gardening gathering at the @ucdavis Feminist Research Institute this am - took some pics - here are some of the better ones. I have had this for many decades. Breaking it out today since it is still relevant. Go #redsox. Free tomatoes - Road 29 and Highway 113 in Davis CA Tailed blue and fiery skipper from my yard yesterday Seen at the @ucdavis Putah Creek Riparian Preserve yesterday. #birds #turtles #california #yolo

Recent Posts: Jonathan Eisen's Lab

MUTATOR: The perfect “vanity” plates for me, to pay homage to some key people

A three bobcat afternoon at Pt. Reyes (and a few other sightings)

A three bobcat afternoon at Pt. Reyes (and a few other sightings)

Elephant Seals at Point Reyes

Elephant Seals at Point Reyes

RSS The Tree of Life Blog

  • A ton to be thankful for -- here is one part of that - all the acknowledgement sections from my scholarly papers
  • Avoiding shoulder surgery for now ...
  • Sept 13 Pics from Yolo Bypass
  • Sept. 12 pics from Yolo Bypass
  • Sept. 11 pics from Yolo Bypass
  • Sept 10 - Beaver at UC Davis
  • Sept 10 pics from UC Davis
  • Sept 10 At UC Davis Riparian
  • Sept. 7 - Rufous Hummingbird in my yard
  • Yellow billed magpie in Davis Sept. 5

Lab Blog Archives

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  • Home
  • About
    • Jonathan Eisen Bio
    • J. Eisen CV 2023
    • Orcid
    • Disclosures
    • Funding
    • Questions for Jonathan Eisen (Advice, Background, Projects, etc)
    • More About Jonathan Eisen
  • People
    • Eisen Lab Personnel
  • Major research areas
  • Projects
    • Seagrass Microbiomes
  • Past Projects
    • Istmobiome
    • microBEnet
    • Genomic Encyclopedia of Bacteria and Archaea (GEBA)
    • Corn Microbiome
  • Publications
    • Eisen Publications
    • Eisen Pubs on Google Scholar
    • Eisen Publications Organized By Topic Areas
    • Publications Table
    • Publications List w/ notes (from 2018)
    • Evolution Textbook
  • Social Media and Regular Media
    • Eisen Lab Blog
    • Eisen’s Tree of Life Blog
    • Press Coverage
    • LinkedIn
    • Instagram
    • Threads
    • microBEnet Blog
    • Twitter
  • Education/Outreach
    • Eisen Talks and Presentations
    • Jonathan Eisen’s TED Talk on “Meet Your Microbes”
    • Jonathan Eisen Talks on Youtube
    • Eisen talks on Slideshare
    • Gut Check: The Microbiome Game
  • Products
    • Software
      • A5 Assembly Pipeline
      • AMPHORA
      • APIS
      • Biotorrents
      • ComboDB
      • CompostBin
      • Mauve Assembly Metrics
      • PhyloSift
      • phylOTU
      • Pique
      • STAP
      • OTU Hunter
      • WATERS
      • Zorro
    • Lab Data
      • Lab Sequence Data
      • Eisen Lab Data at Figshare
      • Sifting Families: SFams
      • Darwin’s Finch Genome Data at Figshare
      • Data from Morgan et al. metagenomic simulation
      • Haloarchaea Data from Lynch et al. 2012
      • Data from Wu et al. 2011 Stalking 4th Domain paper
    • Other
      • 16S PCR Protocol
      • Gut Check: The Microbiome Game
      • Jonathan Eisen’s Figshare
  • Misc.
    • iNaturalist
    • Photography
    • Retroblogging Meetings and Seminars: Posting Scans of Notes
    • Miscellaneous Notes and Scans
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