Some details on past projects from the lab

Informatics and methods

• Environmental Niche Atlas
• iSEEM – Integrating Statistical Evolutionary, and Ecological Approaches to Metagenomics (iSEEM)
• DARPA Funbio
• Phylosift
• AMPHORA

Microbiomes and Microbial Communities

• Corn microbiome and nitrogen fixation
• Duck microbiomes and flu infection
• Rice Microbiomes
• Drosophila microbiomes
• Helicobacter associated stomach microbiomes
• GOS and Sargasso Sea Metagenomics
• MBMO

Citizen and Participatory Science

Microbiology of the Built Environment

• ISS Swab Survey

Phylogeny Driven Sequencing

• MDM
• GEBA
• Haloarchaeal phylogenomics
• Tetrahymena genome sequencing
• aTOL bacterial phylogenomics

Host associated microbial genome sequencing

• Chemoautotrophs
• Wolbachia genomes
• Glassy winged sharpshooter

Scholarly Communication

• ICIS – UC Davis Innovating Communication in Scholarship

DNA Repair Evolution