Skip to content

Jonathan Eisen's Lab

All microbes, all the time. May the microbes be ever in your favor.

  • Home
  • About
    • Disclosures
    • Jonathan Eisen Bio
    • Funding
    • Questions for Jonathan Eisen (Advice, Background, Projects, etc)
    • Eisen CV (Google Doc)
    • More About Jonathan Eisen
  • People
  • Projects
    • Istmobiome
    • Seagrass Microbiomes
  • Past Projects
    • microBEnet
    • SWAN (Studies of Women’s Health Across the Nation) Microbiome
    • Corn Microbiome
    • Genomic Encyclopedia of Bacteria and Archaea (GEBA)
  • Publications
    • Publications Table
    • Publications by Topic
      • Publications: Animal-Microbe Interactions
      • Publications: Phylogenomic and Computational Methods and Tools
      • Publications – Marine Symbioses and Microbiology
      • Publications – Phylogenetic Diversity of Genomes
      • Publications: Plants and Associated Microbes
    • Eisen Pubs on Google Scholar
    • Publications – Pubmed
    • Publications List w/ notes
    • Evolution Textbook
  • Social Media
    • Eisen Lab Blog
    • Eisen’s Tree of Life Blog
    • microBEnet Blog
    • Eisen’s Twitter
    • Eisen Lab on Twitter
  • Education/Outreach
    • Space Microbes
    • Eisen Lab in the News
    • Gut Check: The Microbiome Game
    • Bodega Applied Phylogenetics Course
    • UC Davis Courses
    • Undergrad Genome Project
    • Eisen Talks and Presentations
    • Jonathan Eisen’s TED Talk on “Meet Your Microbes”
    • Jonathan Eisen Talks on Youtube
    • Eisen talks on Slideshare
  • Products
    • Software
      • A5 Assembly Pipeline
      • AMPHORA
      • APIS
      • Biotorrents
      • ComboDB
      • CompostBin
      • Mauve Assembly Metrics
      • PhyloSift
      • phylOTU
      • Pique
      • STAP
      • OTU Hunter
      • WATERS
      • Zorro
    • Lab Data
      • Lab Sequence Data
      • Eisen Lab Data at Figshare
      • Sifting Families: SFams
      • Darwin’s Finch Genome Data at Figshare
      • Data from Morgan et al. metagenomic simulation
      • Haloarchaea Data from Lynch et al. 2012
      • Data from Wu et al. 2011 Stalking 4th Domain paper
    • Other
      • 16S PCR Protocol
      • Gut Check: The Microbiome Game
      • Jonathan Eisen’s Figshare
  • Misc.
    • Retroblogging Meetings and Seminars: Posting Scans of Notes
    • Miscellaneous Notes and Scans
Jonathan Eisen's Lab

Tag: EIsenLab News

Obsession with #Badomics words gets covered in the Wall Street Journal

My obsession with #Badomics words got covered by Robert Lee Hotz on the front page of the Wall Street Journal: Heres an Omical Tale: Scientists Discover Spreading Suffix – WSJ.com.

For more on this see my Tree of Life blog here.

Author Jonathan EisenPosted on August 18, 2012Categories UncategorizedTags EIsenLab NewsLeave a comment on Obsession with #Badomics words gets covered in the Wall Street Journal

Birds, Poop and Roadkill: A Field Guide to Field Guides | Wired Science | Wired.com

Follow up by Wired to the Field Guide story: Birds, Poop and Roadkill: A Field Guide to Field Guides | Wired Science | Wired.com.  Thanks to Russell Neches for helping with photos.

Author Jonathan EisenPosted on March 17, 2012March 17, 2012Categories UncategorizedTags EIsenLab NewsLeave a comment on Birds, Poop and Roadkill: A Field Guide to Field Guides | Wired Science | Wired.com

Book of Germs: The Quest for a Field Guide to Microbes | Wired Science | Wired.com

See Book of Germs: The Quest for a Field Guide to Microbes | Wired Science | Wired.com. for a story about Jonathan Eisen’s quest for a “Field Guide to the Microbes”.

Author Jonathan EisenPosted on March 17, 2012Categories UncategorizedTags EIsenLab News, field guide to the microbesLeave a comment on Book of Germs: The Quest for a Field Guide to Microbes | Wired Science | Wired.com

Is a Field Guide for Microbes in Our Future? Q & A with Microbiologist Jonathan Eisen

An interview with Jonathan Eisen was published on the “Your Wildlife blog”: Is a Field Guide for Microbes in Our Future? Q & A with Microbiologist Jonathan Eisen.

Author Jonathan EisenPosted on March 17, 2012Categories UncategorizedTags EIsenLab NewsLeave a comment on Is a Field Guide for Microbes in Our Future? Q & A with Microbiologist Jonathan Eisen

RSS Lab Blog

  • New paper from Eisen Lab – on ” The Genome Encyclopedia of Spacecraft Associated Microbes (GESAM)” project  March 13, 2023
    New data report paper out from my lab and others. Basically this is a report of genome sequences and some other measures such as MLADIMALDI-TOF) of bacteria isolated by NASA from some of their spacecraft (before they were sent to space). See “Draft Genome Sequences of Spacecraft-Associated Microbes Isolated from Six NASA Missions” https://journals.asm.org/do […]
  • New paper from Eisen lab and others … on challenges with relic RNA in SARS-CoV-2 environmental surveys April 27, 2022
    New paper out from my lab and other labs. Zuniga-Montanez R, Coil DA, Eisen JA, Pechacek R, Guerrero RG, Kim M, Shapiro K, Bischel HN. The challenge of SARS-CoV-2 environmental monitoring in schools using floors and portable HEPA filtration units: Fresh or relic RNA? PLoS One. 2022 Apr 22;17(4):e0267212. doi: 10.1371/journal.pone.0267212. PMID: 35452479; PMC […]
  • New preprint out from my lab and others about environmental monitoring for SARS-CoV-2 in schools and in part about how difficult this is November 18, 2021
    New preprint out on from the Eisen Lab and others. This is from a collaboration between David Coil, Heather Bischel, Karen Shapiro,  Randi Pechacek, Roque G. Guerrero, Minji Kim, and Rogelio Zuniga-Montanez (first author) at University of California, Davis.   It is about environmental monitoring for SARS-CoV-2 in schools and, well, in part about how difficul […]

RSS The Tree of Life Blog

  • Panoramas from the past ...
  • Well, this is about as scammy / spammy as a journal can get ... putting me on an editorial board I did not agree to be on ...
  • Lake Arrowhead Microbial Genomics Meeting History

RSS microBEnet blog

  • 2022 Microbiology of the Built Environment Gordon Research Meeting
  • BioBE Preprint: Controlled Chamber COVID Study

Lab Blog Archives

Enter your email address to follow this blog and receive notifications of new posts by email.

Join 560 other subscribers
  • Home
  • About
    • Disclosures
    • Jonathan Eisen Bio
    • Funding
    • Questions for Jonathan Eisen (Advice, Background, Projects, etc)
    • Eisen CV (Google Doc)
    • More About Jonathan Eisen
  • People
  • Projects
    • Istmobiome
    • Seagrass Microbiomes
  • Past Projects
    • microBEnet
    • SWAN (Studies of Women’s Health Across the Nation) Microbiome
    • Corn Microbiome
    • Genomic Encyclopedia of Bacteria and Archaea (GEBA)
  • Publications
    • Publications Table
    • Publications by Topic
      • Publications: Animal-Microbe Interactions
      • Publications: Phylogenomic and Computational Methods and Tools
      • Publications – Marine Symbioses and Microbiology
      • Publications – Phylogenetic Diversity of Genomes
      • Publications: Plants and Associated Microbes
    • Eisen Pubs on Google Scholar
    • Publications – Pubmed
    • Publications List w/ notes
    • Evolution Textbook
  • Social Media
    • Eisen Lab Blog
    • Eisen’s Tree of Life Blog
    • microBEnet Blog
    • Eisen’s Twitter
    • Eisen Lab on Twitter
  • Education/Outreach
    • Space Microbes
    • Eisen Lab in the News
    • Gut Check: The Microbiome Game
    • Bodega Applied Phylogenetics Course
    • UC Davis Courses
    • Undergrad Genome Project
    • Eisen Talks and Presentations
    • Jonathan Eisen’s TED Talk on “Meet Your Microbes”
    • Jonathan Eisen Talks on Youtube
    • Eisen talks on Slideshare
  • Products
    • Software
      • A5 Assembly Pipeline
      • AMPHORA
      • APIS
      • Biotorrents
      • ComboDB
      • CompostBin
      • Mauve Assembly Metrics
      • PhyloSift
      • phylOTU
      • Pique
      • STAP
      • OTU Hunter
      • WATERS
      • Zorro
    • Lab Data
      • Lab Sequence Data
      • Eisen Lab Data at Figshare
      • Sifting Families: SFams
      • Darwin’s Finch Genome Data at Figshare
      • Data from Morgan et al. metagenomic simulation
      • Haloarchaea Data from Lynch et al. 2012
      • Data from Wu et al. 2011 Stalking 4th Domain paper
    • Other
      • 16S PCR Protocol
      • Gut Check: The Microbiome Game
      • Jonathan Eisen’s Figshare
  • Misc.
    • Retroblogging Meetings and Seminars: Posting Scans of Notes
    • Miscellaneous Notes and Scans
Jonathan Eisen's Lab Blog at WordPress.com.
  • Follow Following
    • Jonathan Eisen's Lab
    • Join 560 other followers
    • Already have a WordPress.com account? Log in now.
    • Jonathan Eisen's Lab
    • Customize
    • Follow Following
    • Sign up
    • Log in
    • Report this content
    • View site in Reader
    • Manage subscriptions
    • Collapse this bar