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Jonathan Eisen's Lab

All microbes, all the time. May the microbes be ever in your favor.

  • Home
  • About
    • Disclosures
    • Jonathan Eisen Bio
    • Funding
    • Questions for Jonathan Eisen (Advice, Background, Projects, etc)
    • Eisen CV (Google Doc)
    • More About Jonathan Eisen
  • People
  • Projects
    • Istmobiome
    • Seagrass Microbiomes
  • Past Projects
    • microBEnet
    • SWAN (Studies of Women’s Health Across the Nation) Microbiome
    • Corn Microbiome
    • Genomic Encyclopedia of Bacteria and Archaea (GEBA)
  • Publications
    • Publications Table
    • Publications by Topic
      • Publications: Animal-Microbe Interactions
      • Publications: Phylogenomic and Computational Methods and Tools
      • Publications – Marine Symbioses and Microbiology
      • Publications – Phylogenetic Diversity of Genomes
      • Publications: Plants and Associated Microbes
    • Eisen Pubs on Google Scholar
    • Publications – Pubmed
    • Publications List w/ notes
    • Evolution Textbook
  • Social Media
    • Eisen Lab Blog
    • Eisen’s Tree of Life Blog
    • microBEnet Blog
    • Eisen’s Twitter
    • Eisen Lab on Twitter
  • Education/Outreach
    • Space Microbes
    • Eisen Lab in the News
    • Gut Check: The Microbiome Game
    • Bodega Applied Phylogenetics Course
    • UC Davis Courses
    • Undergrad Genome Project
    • Eisen Talks and Presentations
    • Jonathan Eisen’s TED Talk on “Meet Your Microbes”
    • Jonathan Eisen Talks on Youtube
    • Eisen talks on Slideshare
  • Products
    • Software
      • A5 Assembly Pipeline
      • AMPHORA
      • APIS
      • Biotorrents
      • ComboDB
      • CompostBin
      • Mauve Assembly Metrics
      • PhyloSift
      • phylOTU
      • Pique
      • STAP
      • OTU Hunter
      • WATERS
      • Zorro
    • Lab Data
      • Lab Sequence Data
      • Eisen Lab Data at Figshare
      • Sifting Families: SFams
      • Darwin’s Finch Genome Data at Figshare
      • Data from Morgan et al. metagenomic simulation
      • Haloarchaea Data from Lynch et al. 2012
      • Data from Wu et al. 2011 Stalking 4th Domain paper
    • Other
      • 16S PCR Protocol
      • Gut Check: The Microbiome Game
      • Jonathan Eisen’s Figshare
  • Misc.
    • Retroblogging Meetings and Seminars: Posting Scans of Notes
    • Miscellaneous Notes and Scans
Jonathan Eisen's Lab

Tag: Raquel Peixoto

Interview w/ Raquel Peixoto on Coral Bleaching and Marine Probiotics

See: Coral Bleaching and Marine Probiotics: Raquel Peixoto, Ph.D. | Microbiome Special Research Program

It is an interview with Raquel Peixoto by Jose Franco as part of our Microbiome Special Research Program activities.

Author Jonathan EisenPosted on February 9, 2019Categories Lab NewsTags coral, probiotics, Raquel PeixotoLeave a comment on Interview w/ Raquel Peixoto on Coral Bleaching and Marine Probiotics

RSS Lab Blog

  • New paper from Eisen Lab – on ” The Genome Encyclopedia of Spacecraft Associated Microbes (GESAM)” project 
  • New paper from Eisen lab and others … on challenges with relic RNA in SARS-CoV-2 environmental surveys
  • New preprint out from my lab and others about environmental monitoring for SARS-CoV-2 in schools and in part about how difficult this is
  • Article about Dr. Connie Rojas getting UC Davis Chancellor’s Postdoctoral Fellow Award
  • The tale of the blue soy products – from contaminated soy milk to a new publication
  • Post-Doc Position available in Ecology of Emerging Infectious Disease
  • The Benefits (and Occasional Drawbacks) of Integrating Evolutionary and Genomic Studies (talk video and slides)
  • New paper from the Eisen lab (with many others) on Global biogeography of chemosynthetic symbionts
  • News Stories about air filter testing for SARS-CoV-2 in Davis, CA schools
  • New collaborative paper out: Air versus Water Chilling of Chicken: a Pilot Study of Quality, Shelf-Life, Microbial Ecology, and Economics 

RSS The Tree of Life Blog

  • Another day to think, to pause, to ponder.
  • Responses to question about functional annotation of metagenomic reads
  • Panoramas from the past ...
  • Well, this is about as scammy / spammy as a journal can get ... putting me on an editorial board I did not agree to be on ...
  • Lake Arrowhead Microbial Genomics Meeting History
  • Wanted - comments on the current @ucdavis COVID plans
  • Best pics from Trip to Monterey - Day 1 - May 25, 2022
  • Videos about using the UCSC Genome Browser for analysis of SarsCOV2
  • Endosymbiosis Animations for "Biodiversity and the Tree of Life"
  • A good bye to my beloved Clover

RSS microBEnet blog

  • 2022 Microbiology of the Built Environment Gordon Research Meeting
  • BioBE Preprint: Controlled Chamber COVID Study
  • Job posting: Tenure-Track Faculty Position in Environmental Microbiology at Virginia Tech
  • Metagenomic Binning / Assembly
  • Wanted: Workers for the COVID19 Mass Testing Operations for UC Davis and Healthy Davis Together 
  • Open Postdoc Position in Finland
  • Open Postdoc Position at University of Oregon BioBE
  • Dust may be an efficient matrix for environmental monitoring of SARS-CoV-2
  • Compilation of guidance (from a few sources) on School Reopening
  • Compiling Information about COVID19 transmission, masks, filtration, schools, etc.

Lab Blog Archives

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  • Home
  • About
    • Disclosures
    • Jonathan Eisen Bio
    • Funding
    • Questions for Jonathan Eisen (Advice, Background, Projects, etc)
    • Eisen CV (Google Doc)
    • More About Jonathan Eisen
  • People
  • Projects
    • Istmobiome
    • Seagrass Microbiomes
  • Past Projects
    • microBEnet
    • SWAN (Studies of Women’s Health Across the Nation) Microbiome
    • Corn Microbiome
    • Genomic Encyclopedia of Bacteria and Archaea (GEBA)
  • Publications
    • Publications Table
    • Publications by Topic
      • Publications: Animal-Microbe Interactions
      • Publications: Phylogenomic and Computational Methods and Tools
      • Publications – Marine Symbioses and Microbiology
      • Publications – Phylogenetic Diversity of Genomes
      • Publications: Plants and Associated Microbes
    • Eisen Pubs on Google Scholar
    • Publications – Pubmed
    • Publications List w/ notes
    • Evolution Textbook
  • Social Media
    • Eisen Lab Blog
    • Eisen’s Tree of Life Blog
    • microBEnet Blog
    • Eisen’s Twitter
    • Eisen Lab on Twitter
  • Education/Outreach
    • Space Microbes
    • Eisen Lab in the News
    • Gut Check: The Microbiome Game
    • Bodega Applied Phylogenetics Course
    • UC Davis Courses
    • Undergrad Genome Project
    • Eisen Talks and Presentations
    • Jonathan Eisen’s TED Talk on “Meet Your Microbes”
    • Jonathan Eisen Talks on Youtube
    • Eisen talks on Slideshare
  • Products
    • Software
      • A5 Assembly Pipeline
      • AMPHORA
      • APIS
      • Biotorrents
      • ComboDB
      • CompostBin
      • Mauve Assembly Metrics
      • PhyloSift
      • phylOTU
      • Pique
      • STAP
      • OTU Hunter
      • WATERS
      • Zorro
    • Lab Data
      • Lab Sequence Data
      • Eisen Lab Data at Figshare
      • Sifting Families: SFams
      • Darwin’s Finch Genome Data at Figshare
      • Data from Morgan et al. metagenomic simulation
      • Haloarchaea Data from Lynch et al. 2012
      • Data from Wu et al. 2011 Stalking 4th Domain paper
    • Other
      • 16S PCR Protocol
      • Gut Check: The Microbiome Game
      • Jonathan Eisen’s Figshare
  • Misc.
    • Retroblogging Meetings and Seminars: Posting Scans of Notes
    • Miscellaneous Notes and Scans
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