All microbes, all the time. May the microbes be ever in your favor.
Author: Jonathan Eisen
I am an evolutionary biologist and a Professor at U. C. Davis. (see my lab site here). My research focuses on the origin of novelty (how new processes and functions originate). To study this I focus on sequencing and analyzing genomes of organisms, especially microbes and using phylogenomic analysis
So – I had an incredible 24 hours from Tuesday about noon to Wednesday about noon and going to provide some details here.
First, I went in to Marin County on Tuesday AM. I headed there because there was a reception in the evening for “Gorilla Doctors“. Gorilla Doctors is an absolutely incredible organization that I have become involved in over the last 1.5 years. What is the Gorilla Doctors group? Well, this is the summary from their website:
Gorilla Doctors is the only organization in the world dedicated to saving the mountain and eastern lowland (Grauer’s) gorilla species one gorilla patient at a time using veterinary medicine and science with a One Health approach. Our international veterinary team provides hands-on medical care to ill and injured mountain and Grauer’s gorillas living in the national parks of Rwanda, Uganda, and the Democratic Republic of Congo (DRC). With only 1,063 mountain gorillas, and an ever decreasing number of Grauer’s gorillas left in the world today, the health and well-being of every individual gorilla is vital to the species’ survival. Our veterinary team regularly monitors the health of mountain and Grauer’s gorillas and intervenes to treat individuals with life-threatening illness or injury whenever possible.
And I have now been working with them to help plan some microbial studies and to help train some of their people in microbial studies. This started with an email from Dr. Tierra Smiley Evans who is their Chief Veterinary and Scientific Officer and who was at UC Davis at the time (she is now on the faculty at UC Berkeley). Together we got a grant from UC Davis to run a microbiome workshop in Rwanda (which happened in October last year). I will write MUCH MUCH more about Gorilla Doctors soon. But for the purposes of this post, what is key is that I have gotten involved in this incredible group and I am fully committed to helping with their mission of protecting mountain gorillas. And I recently was appointed to their Advisory Council. I was invited to this reception due to my role on this council and as I am new to the group I was very excited to go to it and meet many of the people involved.
As the event was in the evening in Marin County and as I really did not want to drive back in the evening from their to Davis, I decided to stay overnight. And so I headed out in the mid morning towards Marin and decided to go to Pt. Reyes on the way there. As part of my “getting in the mood” and learning more about mountain gorillas, I bought the audiobook version of the “Walking with Gorillas” book by Dr. Gladys Kalema-Zikusoka. And I put it on and headed out.
On the way there, I pulled over on highway 37 in the San Pablo Wildlife Refuge to stretch and took some bird pics. Here are a few.
I got back in my car, put the book back on, and continued the drive. I note – the book was quite excellent. More on that perhaps another time. I had this great plan to go to Pt. Reyes and maybe go to the Visitor Center there and sit down and do my Zoom calls. So I pulled in to the Visitor Center parking area, got out my laptop and headset and walked on over to the Center. Well, it was VERY VERY dark. And closed. Oops. I had forgotten about the Government Shutdown. Grr. I had also hoped to use their Wifi for my call and that was not on. Alas, when I tried to connect via my phone, that did not work because, well, my coverage barely had a pulse. So instead I drove around Pt. Reyes and looked for another place to hang out for my Zoom calls. The drive around was very nice. Lots of nice scenes like this:
Eventually I went to Lighthouse Beach and tried to connect there too. But still did not work. So I went for a short walk and took more pics. Here are some.
So my great plan of doing my Zoom calls from the road had failed but, well, onward. I then headed to the place I was staying, the Sand Piper, checked in, and headed over to the reception which was nearby.
The reception was really nice and also incredibly valuable to me. I have seen online many of the people involved in Gorilla Doctors but have not met most of them. And so I got to meet members of the Board, Technical Advisors, and people working for Gorilla Doctors. And I got to see Dr. Sonia Ghose, who is now working in Tierra Smiley Evans’ lab at Berkeley. Sonia was a PhD student in my lab who had worked on frog microbiomes and many issues relating to conservation of frogs. And again, I will write a lot more about Gorilla Doctors at other times. I will note, I told everyone that I was going to go to Pt. Reyes early in the AM Wednesday before heading back to UC Davis for afternoon meetings and that my main goal was to see a bobcat.
Then I headed back to the Sandpiper. It was a nice place. Here are a few pics.
I then set an alarm for very early and went to sleep.
I got up at 6:00 AM or so, packed up my stuff, and then dropped off my key in the dark office area.
And I headed out to Pt. Reyes. Tuesday night I had googled looking for where people recommended going to possibly see bobcats and most sites said to head to the Northern part of Pt. Reyes towards Tomales Point. So I drove slowly through Olema and then through Inverness and eventually headed out towards Tomales Point (heading towards the blue circle on the map below). For most of the drive I was listening to the Walking with Gorillas book …
It was still pretty dark when I was heading through Pt. Reyes and I saw a few interesting things and took some pics but I note – my camera is not really set up to get good pics when it is dark out. But here are a few from dawn at Pt. Reyes.
Then I got to the end of the road at Pierce Point Ranch decided to go for a walk on the Inverness Point Trail.
I did not have a TON of time as I had to get back to UC Davis mid PM, but I ended up going to a maybe 1 hour walk. And of course, I kept hoping I would see a bobcat. Alas, no. I did see a lot of elk and some nice raptors. But no bobcat. But the scenery was very nice.
And I took a bunch of pics with my good camera (Nikon D500, Nikkor 500 mm f / 5.6). As mentioned above, it does not do great in low light so the first pics were sitll a bit rough as it was still barely light out.
But as it got lighter my pics got a bit better.
And eventually I had made it back to the parking lot but not after a rough little stretch where I had massively low blood sugar and had to sit for a bit and eat glucose tablets. So I was sad I had not seen a bobcat. But it was beautiful. And now it was time to at least start heading back out of the park and towards UC Davis for my meetings.
I drove slowly and pulled over a few times as I saw cool things. There were a TON of elk and quite a few coyotes out and lots of raptors. Here are some of the pics I got during my slow drive.
It was pretty spectacular to be honest. And alas time was running out. And then, on a ridge I saw something as I was driving slowly. I pulled over and took some pics.
I was pretty sure it was a cat … but I just kept firing away rather than look in more detail.
Yes, definitely a cat. A bobcat. I could not believe my luck. Here are some of the pics zoomed in a bit …
I saw it walk over the ridge and I drove forward a bit to see if I could find it again but never did. But what a blessing. Only the 5th bobcat I have ever seen. I will cherish this for a long long time.
Compiling some posts of mine from a few years back where I dug into some of the ties between Jeffrey Epstein, Harvard, and some scientists. There have been lots of really good articles and posts about the sordid connections involving Epstein. I am compiling this simply because I spent a lot of time digging into the Internet Archive and Papers and Website of Epstein and others at the time and want to make a record of this information.
August 22, 2019
When, if ever, will @DrMANowak and @harvard do something about their unethical association with rapist Jeffrey Epstein – they took his money, propped up his reputation, and now? crickets – read more from @xeni about this: https://t.co/deoSQ7HbT2
Over the last few days, I have spent some time digging into the sordid connections between rapist / pedophile Jeffrey Epstein and various groups at @harvard e.g., https://t.co/UAwjqbhh6t
Two months ago the president of @harvard put out a self-serving statement about ties to #JeffreyEpstein promising all sorts of "reviews" of those connections – and since then – nothing – what a joke – clearly plan is to try to wash this away https://t.co/vatvjrJo7Mpic.twitter.com/5OZrj7ICe1
So I posted a week or so ago about how I wanted to learn how to ID white headed gulls this year. And I asked for suggestions / advice on how to learn and got some useful tips so I am sharing them here.
Here are some of the posts and responses I got:
Posted to BlueSky
OK I know this will be one of the craziest things I have ever posted, but in 2025 I have decided I really want to learn how to identify seagulls. Suggestions for best places to start learning would be welcome. #birds
I think out on the west coast of the US that’s a particularly tricky challenge! There’s an excellent new photographic guide for N. American gulls – press.princeton.edu/books/paperb…. Also @alvarosadventures.bsky.social is based out there and runs excellent gull ID workshops!
nice! for one, the best NA field guide ever was recently published here: http://www.amazon.com/Gull-Guide-N…As for process, pick the 1-3 most common species in your area and study them exhaustively, when something odd shows up, it will stick out.
OK I know this will be one of the craziest things I have ever posted, but in 2025 I have decicded I really want to learn how to identify seagulls. Suggestions for best places to start learning would be welcome. #birds
Best example of the sea gulls at Disney #birds I don’t advocate feeding them yet that is their behavior. They also deal with heavy fireworks daily and have resilient lungs https://t.co/FTnSMyOwI4
https://t.co/kEnDp4v6Ov has all the sea gulls. From a behavioral standpoint, go to Disney World in Florida or any beach. They will attack you for French fries 🤣
This came from a long ago collaboration in which I was involved with the lab of Craig Cary, who very sadly passed away recently. I got to know Craig from working with him (and Barbara Campbell and others) on a genome project in the late 2000s (see Adaptations to Submarine Hydrothermal Environments Exemplified by the Genome of Nautilia profundicola. PLoS Genet 5(2): e1000362). While we were working on that project, Craig and Ian McDonald contacted me about a proposal they were putting together to do some sequence based studies of microbes from Mt. Erebus in Antarctica. I became a collaborator on their project and their grant was funded in late 2008. Anyway – long long story. Eventually, Craig and others planned a trip to Erebus and alas I was unable to go but a post doc in my lab Morgan Langille was able to join them. And around that time Craig (Cary) hired Craig (Herbold) to work on the project. And the Craigs did multiple things but the part of the project in which I was to be involved did not happen immediately.
But then Craig Herbold moved to New Zealand in the beginning of 2024 and he and Craig Cary resurrected the project. And Craig H. and others (with a little bit of input from me here and there) wrote up the paper that I describe above.
Very sadly, in March Craig Cary passed away. For me, this paper is in his honor. Craig Cary was one of the people who really got me interested in broad studies of microbial diversity from all environments.
I recently gave a talk where I combined what are normally two distinct topics – the Evolution of DNA Sequencing, and the use of Sequencing to Study Microbial Diversity.
So – I went to Rwanda for two weeks. More about the trip later. I wanted to post one thing now. Right before I left on 9/27 for a two week trip to Rwanda, Sonia Palmer-Ghose, who I was travelling with, told me she had found out that no plastic bags were allowed to be brought into Rwanda.
So I had to repack a ton of my stuff as I had used Ziploc bags to sort all sorts of things. I just got home last night and decided to take a pic of the bags and other containers I had used on this trip.
First, one of these things does not belong here. Yes, I found one single plastic bag I had accidentally brought, carrying some insulin pen needles. And most of the rest of these bags were ones my wife and son helped me find as I scrambled to repack.
In retrospect, given the massive number of plastic bags I was going to bring in I am really glad they have this policy as it forced me to bring things I would not throw away.
On side part of this story – just a few hours after I left, my family was added to with two cats we adopted via the UC Davis Orphan Kitten project. And one of them took a liking to the display of bags I put out.
Lessons learned: (1). It is feasible to not use plastic bags when travelling and (2) cats are both unpredictable and predictable.
So I have a talk last night as part of thr introduction to the Lake Arrowhead Microbial Genomics 2024 meeting (aka #LAMG2024). It was kind of a comedic rendition of the history of the meeting with some comments on this years meeting.
Well, I am not really sure when it all started but I am sure when we figured out what was going on. It was July 22, 1984. Forty years ago today. In some ways you could say it was a good day, because I did not die. In other ways, it was a bad day, because I nearly died and also found out what had been going so wrong with my body for some time.
Though as I said I am not sure when it all started, I do know that for a few months my health was deteriorating. I had told my father, who was a doctor (though he did research at the NIH and was not a practicing clinician), that I just did not feel right. I had been mentioning this for a month or more. But in July I mentioned it more. And he did not seem to think there was anything to worry about.
I was a pretty active kid then and was quite athletic – at least – before my body started having issues. I think this is partly why my dad thought that I must be fine. I played soccer, baseball, street hockey and various other sports.
I had even made the Varsity Baseball team as a sophomore and had done OK.
As an aside, it is kind of fun to see discussion of how I played baseball with Anthony Dilweg who went on to play QB for the Green Bay Packers. Anyway … back to the story. And as another aside, it is cool to me that I am still in touch, at least a tiny bit, with a few people from this team (e.g., Tom Nylen, Andy Keith).
Anyway – more on that in a bit. It was now the summer. And I was still pretty active. Most days went something like this. I was taking Driver’s Ed classes in downtown Bethesda getting ready to get my drivers license. I would bike to the class. Then I biked over to work at the Carey Winston Company where I did data entry, in a job that my friend Ross Kaminsky helped me get. Then I would bike to my High School (Walt Whitman) where I had baseball practice for a summer league team. And then I would bike home. On days when I had a game I think I would bike home, get my uniform on, and then either bike (if the game was nearby) or get a ride from my mom or brother. With all this activity it made a little bit of sense that I might also feel tired all the time, and also that I was pretty skinny. So I think my dad thought “Oh, he must be fine.”
But I knew something was up. Something definitely was not right. And a few days before July 22, I had decided I was going to force the issue. In part, this was because I was feeling worse and worse. But also in part it was because my brother and I had our first backpacking trip planned, with a friend Matt Smith. I was excited about this but also a bit worried due to my health issues. Basically, I was just really really tired. That was the number one symptom. Just crazy tired. And I felt weak. Really weak. (I had other symptoms but more on those later). So here I was – getting ready for my first real outdoor adventure – to hike up Old Rag Mountain with Matt (and Eagle Scout) and my brother and to camp overnight and then get picked up the next day. This did not seem like an ideal time to do that, given that I felt like I could barely walk some of the time.
You see, despite being really active, and doing OK at some of these activities, I just knew something was wrong. In retrospect, something had been going wrong for actually quite some time. Amazingly, I even found that I discussed this pretty openly with people writing stories for our school paper about the Varsity Baseball team in the Spring. For example:
I had a good throwing arm as a pitcher so I could do ok. But I was tired all the time. Like really really tired. For every game. And things had been getting worse over the Summer. So – even though my dad did not think something was wrong, I did. So as I said, I was going to force the issue.
But then somewhere July 18th or 19th, I was the starting pitcher for our team in a baseball game and I pitched phenomenally well – a two hit shutout. I felt awful through the whole thing, but the result was excellent. And I felt like, if I could do that, I must be fine. So we decided to go ahead with the backpacking trip.
So – anyway – back to the summer league game. I pitched well and decided that it was OK to go on this trip. Here is what I wrote about that in a school essay (with corrections from my English Teacher)
This was unquestionably one of the dumbest decisions I have ever made. My mom and dad drove us to the trailhead for Old Rag Mountain, I think on Saturday morning. And then eventually me, Mike and Matt headed up the mountain.
And here is where the shit truly hit the fan. I did not tell you one of the key other symptoms I had, which was thirst. Just devastating thirst. I could not imbibe enough liquid. I basically drank my 2 day supply of water in like 30 minutes and then basically polished off as much of the water of my companions that they would let me have. So just like that, we were out of water basically. Oh, and I was also peeing all the time too. Yay.
Here is what I wrote about that in that school essay mentioned above (with corrections from my English Teacher)
Somehow, yes, we made it up Old Rag Mountain and ended up sleeping near the top. The whole time, I felt like I was dying. And in fact, I was. Somehow I made it through the night. Also – despite what I said in the essay – my brain was not functioning particularly well and I really do not remember much about that night. Maybe my brother or Matt Smith can chime in at some point. I vaguely remember that we could not find any water and that Matt had brought some adult beverage to drink which he consumed and my brother had to try and figure out how to deal with the drinker and the dying person at the same time. Anyway – it was not a good night. But I did make it through the night.
I do not have any pictures from the trip but if you are interested – here is some information about hiking up Old Rag:
Although I was alive the next morning, I was not doing well. I was so so so so so so so tired. And so confused. And so so so so so so thirsty. And since we were basically out of water, things were not good. On our hike down the other side of the mountain, I started drinking from puddles and trickling baby streams of water. Anything I could find. I slurped from muddy puddles like a dog. And I could barely move. My body hurt like never before. My legs were so weak. And my brain was not all there.
Finally we got down to near where we were to be picked up and there was a house and maybe a farm down there. But most importantly, something there I think saved my life. A hose. I turned it on. And drank. And drank. And drank. And drank. And then peed. And drank some more. And then peed more. And then drank. We waited there for a bit for Matt’s parents to pick us up but the water I got from that hose I am fairly certain saved me.
Clearly, the next thing to do was to go to the hospital. But that was not to be. We got dropped off in the early evening and my dad’s lab had some sort of party that we went to. I barely remember this but I do know they were playing volleyball and despite this being one of my favorite activities normally I did not play. I just sat on the ground nearby, not moving. And at some point I think my parents / my dad realized there was in fact something really wrong.
I vaguely remember that we left the party and went to a drug store (I think People’s) to buy a urine sugar testing kit. And at some point we tested my urine and it was off the scale – literally filled with sugar. And so my dad said something to the effect of – “You have diabetes, we have to go to the hospital.” And off we went to Bethesda Naval Hospital to the emergency room (because my dad worked at the NIH and was a commissioned officer in the Navy, we got our medical care there).
I think I was pretty much not fully alert during all of this. But eventually I was transferred to a bed in the pediatrics unit and then spent many days in the hospital recovering and learning how to treat myself as a diabetic.
In many ways, I was lucky to be alive. I easily could have died on that backpacking trip and if I had not found that hose at the end of the trip, I think I might have died out there. I was in rough shape and things had been going poorly for a while. I looked like a famine victim. I had lost something like 40-50 pounds over a few months. I was in full blown diabetic ketoacidosis and slipping away until they gave me IV fluids and eventually insulin in the ER. Here is the page from my admissions (missing some details on various tests they ran, but suffice it to say I was not doing well)
So in retrospect again, it is pretty crazy that I had not gone in to get checked out before this crisis. Certainly, my dad, an endocrinologist (though again, one who did research in a lab at the NIH and did not practice) probabiy should have caught this earlier. We even had just been in Quebec where my dad was attending the Endocrine Society Annual Meeting and I had been surrounded at various events by world leading endocrinologists.
At dinners, I was getting up all the time to pee, but I did not announce this. And if anyone noticed me seeming fidgety, they probably either thought I was a typical bored teenager or maybe thought I was on drugs.
I note – one of the issues with my deteriorating health was that it came along slowly, over many many months. It was like the proverbial frog in the frying pan story – I just kept adjusting and adjusting and adjusting my baseline expectations about what was normal and what was OK slowly over time. And I did not even notice really all the issues. The one I noticed most was fatigue and weakness. What I did not really notice, which seems really bizarre in retrospect, was two key other symptoms that had gotten worse and worse and worse over the months. These were thirst, and the need to pee all the time.
For example, by that time in Mid July, my daily routine was not quite as I laid it out above. This was the daily routine with the full details with the extra new details highlighted with underlining and bolding.
Most days went something like this.I got up in the morning early because I had to pee. Then I went downstairs and made a large two liter pitcher of orange juice from a frozen can. And I drank most of it. I was taking Driver’s Ed classes in downtown Bethesda getting ready to get my drivers license. I would bike to the class. Although it was only about a 20 minute bike ride to the class, I would stop on the way at Montgomery Donuts to get a drink and use the bathroom.
Then I would go to class where every 20 minutes or so I would get up to pee. Then I biked over to work at the Carey Winston Company where I did data entry, in a job that my friend Ross Kaminsky helped me get. While working I would spend a lot of time getting up to use the restroom and to buy sodas to quench my thirst.Then I would bike to my High School (Walt Whitman) where I had baseball practice for a summer league team. And during practice, or even during games, I would have to sneak off all the time to pee in the bushes and to also get a drink. And then I would bike home.
Oh and of course, since I did not know I was a diabetic, I was probably making things worse by drinking sweetened drinks all the time. Yes, they seemed to quench my thirst. But they just added more sugar to the fire.
And again, in retrospect, I had been “building” up to this for some time. During the second semester in high school that Spring, I remember having to pee between classes a lot. I remember even being stressed during classes about needing to pee and get excused all the time even before class.
Yes, clearly, it would have been better to have figured things out sooner. But somehow, I did not die. And that was a good thing. As I was in the Navy Hospital, trying to comprehend what this all meant, for reasons that I am not entirely sure of, I did not spend a lot of time lamenting about “Why me?” I mean, sure, it sucked. And sure, I knew my life was altered. But I somehow just wanted to move forward, get on with my life, and deal with the altered reality.
This moving forward thing in part I think came from my general nature. But there were also a few things that happened while I was in the hospital and shortly after that really really helped my perspective and I mention some of these in the next few paragraphs.
One thing that helped me immensely once I was in the hospital was that the pediatrician who took care of me was Dr. Marion Balsam, who happened to be the mom of a friend Ross Kaminsky. I had hung out a lot with Ross a few years before that and knew his mom and this was just remarkably comforting. Plus she was a just phenomenal doctor.
Another thing that really really helped me move forward was the fact that there was a kid in the bed next to me who had brain damage from some type of accident. I realized that things could be much worse than having to take shots and deal with a defective pancreas.
But even with those two things helping me in ways, I was still not fully in a good place mentally. For example, I was at the Bethesda Naval Hospital and alas I had a painful conversation with one of the orderlies who was taking care of me on Day 2 or so. You see, I had dreams of going to the US Naval Academy and playing baseball there and we were discussing this. I had even had a discussion with the Navy Baseball Coach and had either taken or at least signed up for the ASVAB test (I can’t remember anymore). Alas, the orderly then, matter of factly, told me, you can’t join the Navy as a diabetic. Well, shit, there went that dream.
So, you know, even though physically I was starting to feel better than I had in months (IV fluids and insulin for the win …), mentally I was still not in a completely great place. But fortunately I had a lot of visitors (my family and friends must have worked hard to keep me occupied). This was really really uplifting. Someone – possibly Ross – even took me on my first “outing” to get out of the hospital ward. We went bowling at the Navy Bowling alley nearby).
And one of those visitors definitely changed my mental state. You see there was a girl who I had a bit of a crush on who came to visit me in the hospital because it turned out she was also a diabetic (I had not known that). And, well, eventually we developed a relationship – my first real girlfriend. Honestly, I think she probably is more responsible for me being alive today than anyone else because she taught me about diabetes and I wanted to get my diabetes in control to show her that I could do it.
A fourth thing that definitely helped me was that my family had a trip to Alaska planned for a few weeks from when I went in to the hospital and Dr. Balsam encouraged us to still go on the trip. Since my dad was a doctor, in theory he could help take care of any issues that arose. So I had incentive to show that I could manage my diabetes as soon as possible so they would let me go on this trip. And we did. And the trip was incredible. Here are a few pics from that trip:
Although another time I will tell the story about how I cracked a rib and my dad was worried I had punctured my spleen when I crashed into a fire pit while playing frisbee at a campsite in the middle of nowhere. And we cut our trip short by a day to get me to a hospital for a check up. But another time.
A final thing that helped me move forward is, well, that the medicine (insulin basically) was like magic. When they first gave me some in the hospital, I literally think I could feel my body starting to wake up and work again. And since I was almost 16 and had been a science dork of sorts, I actually already knew what insulin was and what diabetes was. I had not imagined I would get it of course, but knowing what it was all about certainly helped too.
Anyway, 40 years ago today, I got knocked down. But I got back up. And it has certainly not been easy. But I am still here. Always looking forward. And looking backwards, from a historical point of view, but rarely from a “why me” point of view. I truly feel blessed to have had these extra forty years. Here’s to forty more.
UPDATE 7/25/2024
Got some nice responses to my post at various social media sites and thought I would share links here.
Was at the end of a bike ride to work yesterday and was biking by the UC Davis Vet School when I heard a screeching bird. I was not sure what it was but I knew I had heard something like it before and also that it was not common.
So (1) got off my bike (2) got out my iPhone (3) opened the Merlin App and (4) starting the “Start New Recording” option and very quickly it IDd the bird as a Cooper’s hawk.
So then I got out my camera (I had brought a relatively new travel camera – a Nikon CoolPix) with me on my ride and had been taking pics along the way but put it in my backpack when I got near the Vet School – assuming incoorectly I would not want to take any more pics now that I was close to my office).
And I tried to figure out where the call was coming from. It took a bit but I found the bird and first made a video with my phoen and then took some pics. They are below.
So I got up really early on July 12th to get out and go to Yolo Bypass to go for a hike before it got too hot. The weather prediction was for it to get to above 110 °F so I really wanted to get out early. And I was really looking forward to see what creatures were out early in the AM
I left my house jsut before 6 and the sun had already risen but was quite orange still.
Possibly A Blue Grosbeak Seen on the Way to Yolo Bypass
And then when I got there, alas, the gate was closed, even though it is supposed to be opened at sunrise.
Gate at Yolo Bypass Closed
There was also a woman there in her car waiting to get in. We chatted a bit. She was an artist, from Canada, and was hoping to get in early because the lighting would be nice. She told me about her dogs (that were not with her) and her family. We say a few interesting critters from the levee road outside the gate including a mink. I did not get a picture of the mink alas. But I did get a pic of a hawk.
We saw some pickup trucks driving by that we hoped would be someone to open the gate but after 20 or so minutes I decided I wanted to go SOMEWHERE to go for a hike and was not going to wait for the key person. So I headed off to the Davis Wetlands. Not as much shade there and not really where I wanted to go. But I felt like it was the next best option.
On the drive in to the Wetlands I saw an otter family cross the road (no pics of them). But it seemed to be a good omen. I parked, got my stuff together and headed out for a walk. It was not about 7 AM. And it was already getting pretty warm. And lo and behold, just five minutes into the walk I got a nice sighting of a muskrat, swimming towards me.
And got a little video
And then continued on my walk and got to see some nice birds and got a few good pics of some including these:
My apple watch kept getting annoyed when I stopped to look at birds.
I took a few selfies too …
And on the way back I stopped by the spot where I had seen the muskrat and before I could get my camera ready I startled a beaver (no pics alas). And a few minutes later the muskrat came out.
And then I was off to my car to head home. But on the way out of the wetlands I also saw some deer.
Overall I would say that this was a pretty nice outing. More mammals than I was used to seeing in a day. Mink, otter, muskrat, beaver, and deer. Cool.
And then I headed home. But this was not the end of the story. Because just around sunset my wife said our daugther was a bit bored and had not gotten out all day and I asked if I might be able to take her out to do a quick shopping run. I said sure, espeically since I knew that my daughter was likely willing to do a little drive to look for wildlife afterwards. So we headed out, made a stop to do some quick shopping, and then I asked my daughter if she wanted to drive by the entrance of Yolo Bypass to see if we could catch the bats coming up form under the causeway. See a post I wrote about these bats from 2014 here: https://phylogenomics.me/2014/07/26/bat-tour-at-yolo-basin-wetlands/.
So we headed over to Yolo Bypass, with some trpidation because of the earlier locked gate. But now the gate was not locked although it was likely to be locked shortly since they close up at sunset. And it was just getting to be sunset. So we parked on the little levee road where I had parked in the morning, got out, and lo and behold got to see the bats flying out from the causeway. I made a short video and then my phone battery died so alas I did not make others. Here is that video. My phone makes it look lighter than it was out — it was actually quite dark.
And then when we had enough of the bats we decided to do a little drive around rural areas to see if we could see any wildlife. We do this often, although never before had we done this after sunset. And we did what we always do on drives. We guess what mammal species we might see. I chose opoosum. She chose coyote. And then changed her mind thinking that was too unlikely so she chose skunk. We drove around slowly on some rural roads and saw a lot of bunnies but no other mammals (we see so many bunnies and their relatives around here that we no longer allow them as one of the guesses).
And then on a rural road between Davis and Woodland we hit the jackpot. Juveniles coyotes. OMG. OMG. OMG.. They were so cutre. Got some videos and a few pics (with my cell phone – my real camera does not do well in low light). Actually fumbled quite a bit and missed a lot of the scene but at least caputred some of it. Here are some pics and videos.
We were SO excited about this. Just amazing to see these juvenile coyotes. And even though my daughter had originally picked coyote but then changed her pick to skunk, we both agreed she deserved credit for the original pick. And though we wanted to stay and see if the coyotes came back, we decided to head back home. And then a few minutes later we struck gold.
A mother and juvenile fox. I have never seen a fox around here. And these two were not exceptionally shy so we got good looks.
Made a few movies – the juvenile headed into the brush.
After the juvenile headed into the shrubs the adult stayed around and just sat there. So amazing.
What a day. It went from a possible disaster with Yolo Bypass being closed to a day where I saw a slew of mammals – a mink, two otters, a muskrat, a beaver, two deer, many bats, two juvenile coyotes and a juvenile and adult fox. Just amazing. And my daughter was beyond thrillled.