Crossposting from microBEnet:
Some new papers that may be of interest to people:
- FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus.
- Statistical Methods for Functional Metagenomic Analysis Based on Next-Generation Sequencing Data PhD thesis from Pookhao, Naruekamol
- Profile Hidden Markov Models for the Detection of Viruses within Metagenomic Sequence Data
- Parallel-META 2.0: Enhanced Metagenomic Data Analysis with Functional Annotation, High Performance Computing and Advanced Visualization
- MP3: A Software Tool for the Prediction of Pathogenic Proteins in Genomic and Metagenomic Data
Jonathan Eisen's Lab 