At #UCDavis today: Vance Vredenburg: ‘Amphibians at the forefront of the Sixth Mass Extinction’

Dr. Vance Vredenburg will be speaking on ‘Amphibians at the forefront of the Sixth Mass Extinction’ at 4:10pm in 176 Everson Hall today, Thursday Oct 22.

Dr. Vredenburg is a leading amphibian conservation ecologist, and an Associate Professor at San Francisco State University. He earned his doctorate at U.C. Berkeley.

All are welcome to attend his ‘no-host dinner’ at 5:30 (location to be announced at the seminar). Also, grad students/postdocs who responded to the lunch invitation are reminded to attend, 12 noon in 1017 Wickson.

Here is a copy of the information from his website: http://biology.sfsu.edu/people/vance-vredenburg

“ Vance Vredenburg was raised in Mexico and the United States. His scientific training began as an undergraduate at the University of California Santa Barbara where he worked on ecological research projects in coastal California, Alaska, the Caribbean and Antarctica. His Ph.D. from the University of California at Berkeley (2002) included whole-lake experiments that showed recovery of declining frogs in the Sierra Nevada, California after removal of introduced trout. His current research focuses on the impacts of emerging infectious amphibian disease (e.g. chytridiomycosis), the phylogeography of amphibians (using genetics, morphology, and mating behavior), and climate change impacts on aquatic food webs using stable isotopes. Vredenburg is the co-founder of AmphibiaWeb (www.AmphibiaWeb.org), an online conservation resource for the world’s amphibians. His research is currently funded by the National Science Foundation and seeks to understand how some populations of frogs survive epidemics. Vance Vredenburg is a research associate at the California Academy of Sciences and the Museum of Vertebrate Zoology.”

Asst. Prof. in Quantitative Ecology at UCSB h/t @seb_schreiber

Posting this which I got from Sebastian Schreiber

Assistant Professor Quantitative Ecology, UCSB

The Department of Ecology, Evolution and Marine Biology (EEMB; www.eemb.ucsb.edu) at the University of California, Santa Barbara invites applications for a tenure-track faculty position in Quantitative Ecology, at the rank of Assistant Professor. We are searching for a highly creative and interactive scholar who fits into our multidisciplinary department. The area and system of study are open, although we are most interested in candidates who will address fundamental topics in ecological theory through the use of modeling and analytical approaches. We encourage applications from candidates who adopt an integrative approach in their research.

The candidate is expected to have or develop an internationally recognized research program, mentor graduate and undergraduate students in the candidate’s area of expertise, and teach both graduate and undergraduate courses. This position requires a PhD at the time of appointment.

Applicants should submit: 1) a cover letter, 2) a curriculum vitae, 3) a statement of research that covers research accomplishments and future plans, 4) a statement of teaching experience and interests, 5) three selected publications, and 6) letters of recommendation from three to four persons with the ability to evaluate the candidate.
EEMB is especially interested in candidates who can contribute to the diversity and excellence of the academic community through research, teaching and service.
Submit applications electronically at: https://recruit.ap.ucsb.edu/apply/JPF00583
Review of applicants will begin November 25, 2015 and will continue until the position has been filled.

The University of California is an Equal Opportunity/Affirmative Action Employer and all qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability status, protected veteran status, or any other characteristic protected by law.

Beware of mimicry in #OpenAccess journals

Wow – just got this email from a new journal soliciting papers:

Dear colleagues,
we are pleased to announce that the call for papers for the Special Issue “Molecular Phylogenetics 2016” is now open with the BioMed Research International
journal.
The scope of the Special Issue covers:
•  Evolutionary genomics
•  Molecular phylogenetics and systematics
•  Molecular dating, inferring complex scenarios of coevolution, reconstruction of complex ancestral traits and events in genome evolution
•  Development and phylogeny (evo-devo)
•  Models and algorithms for molecular evolution
•  Applied phylogenetics: genotyping and barcoding of biological objects, molecular anthropology, molecular epidemiology, forensic science, etc.
•  Molecular ecology, biodiversity, and biogeography
All submissions go through the peer-review process. The journal publishes research and review articles with no page limit. It is an Open Access journal, and
fixed article processing charges apply to accepted manuscripts (www.hindawi.com/journals/bmri/apc). The journal is indexed by all major abstracting and
citation systems.
Important deadlines:
Manuscript due: 26 February 2016
First round of reviews: 20 May 2016
Publication date: 15 July 2016
Earlier manuscripts will be processed for review upon submission date. The Editors team is making all effort to provide for a fast and friendly review
process.
Detailed information on the Call-for-Papers is available online at http://www.hindawi.com/journals/bmri/si/295862/cfp.
Contents of the Special Issues 2013 and 2014 are available online at http://www.hindawi.com/journals/bmri/si/585782 and
http://www.hindawi.com/journals/bmri/si/392635.
We welcome all contributors interested in submitting their research.

With best regards,
the Editors team of “Molecular Phylogenetics 2016”

Whatever you think of Hindawi as a publisher (I am skeptical) the name “BioMed Research International journal.” struck me as very strange.  It seems like a mimic of Biomed Central.  So I googled around and found others who also think it is a mimic (and not in a good way).  For example see Jeffrey Beale from Sept 2014: New Predatory Publisher Copies Look and Feel of BioMed Central.

Yuck.  The name appears to be a clear attempt to confuse authors that they are affiliated with Biomed Central.  And the format and look appears to be doing the same too.  So thus Hindawi has moved from my “maybe a spammy predatory publisher” to “definitely a spammy predatory publisher” list.

#UCDavis Provost’s Forum 10/21 “Universities, Hospitals and the Social Good” w/ Julie A. Freischlag & Glenn Richard Olds

Dear UC Davis Faculty, Staff, Students and Community Members,

We are delighted to announce that the first lecture in the 2015–16 season of the Provost’s Forums on the Public University and the Social Good will take place on Wednesday, October 21, 2015.

The first lecture of the season, titled “Universities, Hospitals and the Social Good,” features Julie A. Freischlag, Vice Chancellor for Human Health Sciences and Dean of UC Davis School of Medicine, and Glenn Richard Olds, founding Dean of UC Riverside School of Medicine and President of St. George’s University. Our speakers will talk about the complex and interconnected relationship between medical schools and the hospitals and other clinical settings that they rely on to train medical students. Dean Freischlag will discuss the benefits and challenges of partnerships between universities and hospitals, as well as share insights on opportunities for mutual success during a time of intense change in health care and health education. Dr. Olds will discuss how the new medical school at UC Riverside was built around community needs, using the community’s resources as a teaching platform. He also will discuss his work on replicating this model on a national scale in his new position as the President of St. George’s University in Grenada.

The event will take place at the Kalmanovitz Appellate Courtroom in King Hall (UC Davis School of Law) from 3 to 4:30 p.m. with a reception to follow until 5 p.m. Light refreshments will be served.

For more details about this event, please see the attached flyer or contact Francis Santos​.​

In addition, please forward this information to any interested parties, as all events are free and open to the public.

Freischlag & Olds_10-21-15.pdf

Wrap up of #WiSTEMspotlight: How Men Can BE Allies for Women in STEM: Bridging the Gender Gap.

Thanks to Digital Science and Laura Wheeler for inviting me to participate in this amazing forum yesterday on Ada Lovelace Day on “How Men Can BE Allies for Women in STEM: Bridging the Gender Gap.” I participated via Google Hangout (everyone else was in London).  It was an inspiring conversation … see more about the event in the Storify made by Digital Science below:

I cannot wait: Rachel Whitaker is coming to #UCDavis 10/29 to talk about viruses in microbial populations

Dr. Rachel Whitaker

Associate Professor of Microbiology

University of Illinois at Urbana-Champaign

“What Won’t Kill Me Makes Me Stronger: Expanding the Role of Viruses in Natural Microbial Populations”

Thursday, October 29, 2015

4:10 p.m.

1022 Life Sciences

Host: Scott Dawson

(scdawson)

(If you wish an appointment with the invited speaker, please contact the host.)

Today at #UCDavis: Claudia Schmidt-Dannert on Natural Products from Fungi

Just got sent this … looks like it should be good (although am annoyed at the use of the term "higher")

Tuesday, October 13, 2015 4:10 PM

179 Chemistry

Host: Justin Siegel

refreshments in Room 172 before the seminar

Prof. Claudia Schmidt-

Dannert
Dept. of Biochemistry University of Minnesota

“Uncovering the Natural Products Potential of Higher Fungi (Basidiomycota)”

CSchmidt-Dannert10.13.2015Siegel.pdf

Genome Engineering #GESB16 in Gent – for Men Only #YAMMM

So I just got an invite to this meeting:

Looks interesting.  Not that I work in the field.  But I decided to check it out.

So I went to the website.

Blech.

Here are screenshots of the “Top Speakers”

32 speakers.  30 of which are men. *

That comes to 6% female, 94% male.  Not a good thing.  Shame on VIB Conferences and shame on the sponsors

I plan to send complaints to these sponsors to let them know I do not believe they should be sponsoring a meeting with such a clear gender bias.  
I also am going to register the meeting at Gender Avenger.

* I realize it is not always possible ot identify people’s gender from names and appearances.  I looked up.  I looked at all the more detailed descriptions of the speakers to see how they were described (as in, what pronouns were used).

UPDATE 11-28-2015

EMBO Symposium “A New Age of Discovery for Aquatic Microeukaryotes” 1/26-29, 2016

Posting this notice I receive from Jon Kaye at the Gordon and Betty Moore Foundation:

Colleagues –

We have lined up a fantastic group of speakers for the upcoming EMBO Symposium on aquatic protist ecology and evolution and are seeking additional speakers and poster contributions to be selected from submitted abstracts!

Abstract submission deadline is approaching — October 22. The symposium is stimulated by the completion of the Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP) and major milestones achieved by the Tara Oceans and Malaspina expeditions. The goal is to bring together the MMETSP, Tara Oceans, Malaspina, and well-established protist model systems communities. The Symposium will take place in Heidelberg, Germany from 26–29 January 2016.

http://www.embo-embl-symposia.org/symposia/2016/EES16-01/index.html

Invited speakers include the following scientists whose specialties range from marine and freshwater microeukaryote ecology to studies of long-standing protist model systems such as Tetrahymena and Chlamydomonas:

http://www.embo-embl-symposia.org/symposia/2016/EES16-01/speakers_gallery/index.html

The sessions are:

1. And You May Ask Yourself, “Well…How Did I Get Here?”: Biodiversity Patterns across Space and Time
2. Love–Hate Relationships: Intimate Interactions, from Trophic Interactions to Symbiosis
3. Weird and Wonderful Organelles and Symbionts—Photosynthesis, Respiration, and Beyond
4. Knock, Knock—Who’s There? Extracellular Signaling
5. Genetic Transportation: Causes and Consequences of Gene Exchange in Protists
6. Small Microbe, Big World: Microeukaryotes in Aquatic Ecosystems
7. Situation Normal, All Stressed Out
8. Evolutionary Tipping Points: How Do Protists Adapt?

The organizers will be selecting poster and additional oral presentations from the submitted abstracts. The abstract submission deadline is 22 October 2015, and the registration deadline is 3 December 2015.

Wrap up of talk by Rich Lenski at UC Davis

Rich Lenski gave a talk today at UC Davis – part of a two talk series. This was a presentation more for the public and tomorrow he gives one more for the science crowd. Today’s talk was a really nice overview of Lenski’s work on long term evolution experiments in E. coli. I made a Storify of the tweets about the talk: