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microBE.net blog: microBEnet: the microbiology of the Built Environment network
Tag Archives: QIIME
As anyone who has read a recent article on microbial ecology knows, the name of the game is ordination plots. Looking for post-hoc patterns in 16S and metagenomics surveys is pretty much par for the course. Depending on your question … Continue reading
The preprint for the Phinch software paper is now online (one of my Legacy Eisen Lab projects) Please enjoy the PDF on bioRxiv while we patiently wait for the manuscript to go through the peer review process: Bik, H.M. and … Continue reading
UC Davis will be hosting a 2.5 day QIIME workshop following the SMBE Satellite Meeting on Eukaryotic -Omics, running Thursday afternoon May 2nd through Saturday May 4th. Meeting participants and local Bay Area researchers are encouraged to attend. Due to … Continue reading
Interesting paper on strategy to use PCR to simultaneously characterize eukaryotic, bacterial and archaeal microbes
Interesting new paper in PLOS One: PLOS ONE: Simultaneous Amplicon Sequencing to Explore Co-Occurrence Patterns of Bacterial, Archaeal and Eukaryotic Microorganisms in Rumen Microbial Communities Full citation: Kittelmann S, Seedorf H, Walters WA, Clemente JC, Knight R, et al. (2013) Simultaneous Amplicon … Continue reading