These are actual living microbiologists #actuallivingscientist

Crossposting this – which I already posted at microBEnet I have been tracking #actuallivingscientist postings on Twitter compiled those by people doing microbiology. Actual living microbiologists.

The future of Google Scholar

There is an interesting interview out in Nature where Richard van Noorden interviewed Anurag Acharya from Google Scholar: Google Scholar pioneer on search engine’s future : Nature News & Comment.  Definitley worth a look.  It has tidbits on the past, present and future of Google Scholar.

There are also some follow ups to this.  For example on Twitter I saw the following exchange:

//platform.twitter.com/widgets.js

I am in general agreement here that the cmmnity needs to start thinking about an open alternative.  Yes, I like Google Scholar (e.g., see my post on the Google Scholar blog: Using Google Scholar in Scholarly Workflows that I wrote in honor of the 10th Anniversary og GS.  But the lack of an API interface and the givng in to publishers demands seems lame.  So I do think we need to start to build up new strategies.  //platform.twitter.com/widgets.js

Why I Tweet and Blog: Captured by Beryl Lieff Benderly

You know, many people ask me – why do I talk to science reporters so often.  They ask this and then claim that science reporters are just all kinds of evil because they always get quotes and facts and concepts wrong.  Well, that has really not been my experience.  Sure, I have my examples of problems.  But overall, I have been impressed and pleased more often than not.  And here is a great example. I was interviewed a while back by Beryl Lieff Benderly about my somewhat obsessive experimentation with social media for communicating science.  And then, of course, I forgot about it.  So I was exceptionally pleased when I saw the story come out today: To tweet or not to tweet? | Science Careers.  Beryl did a remarkably good job in capturing the essence of my thoughts about Tweeting, Blogging, social media, and science communication.

If you want to know what I think about how to not get overwhelmed with Twitter, how to not spend too much time on social media, and what I think abotu aboutb social media, you don’t need to wait for me to try to write my thoughts on the topic down.  Read what Beryl wrote.

Hmm .. apparently I am not supposed to be posting about #UCDavis in "social media" (SEE UPDATE AT BOTTOM)

At the suggestion of a colleague I have been browsing through the UC Davis Policy and Procedure Manual – Chapter 310, Communications and Technology Section 40, University Communications: Publications, Graphic Standards, Marketing, and Media Relations.

Much of it is straightforward but much of it seems to basically be discouraging any direct social media posts or interaction with the press. See for example:

The News Service unit in University Communications is the exclusive source for developing and disseminating news about UC Davis to the general public via newspapers, radio, television, magazines, and the World Wide Web, including social media and related channels. The News Service unit determines the newsworthiness of significant developments and activities in academic research; administrative programs; accomplishments of faculty, staff, or students; events; and other campus matters. It conducts or coordinates direct contact with news media representatives, and assures that media relations are timely, accurate, comprehensive, and of broad public interest.

and

Generally, the news media will contact the News Service to find a source for a story. If a reporter contacts a source directly, that faculty member, staff member, or student shall notify the News Service

Hmm … so ..  when I was contacted by multiple reporters about the pepper spray incident and for my comments on it and on the handling of it by UC Davis I was supposed to notify the UC Davis News Service.  I suppose I could have done that.  But how about this – I communicate with dozens if not 100s of reporters on Twitter about all sorts of things.  Should I notify the news service about each contact?  That would actually be kind of fun.  They would block my emails very soon thereafter I am sure.
I am also wondering about the role of the News Service as the “exclusive source for developing and disseminating news” “via newspapers, radio, television, magazines, and the World Wide Web, including social media and related channels.”  So is this saying I am no longer supposed to write about UC Davis on social media?   No more blogging?  No more Twitter?  How does this jibe with all the retweets and reposts I get by official UC Davis groups/people?  
In the end I can imagine that the UC Davis administration would say this wording is not quite what they mean.  But it is there.  And technically, I am supposed to follow it.  Oh well, off to kill all my social media accounts.  Yeah, right.

UPDATE: Barry Shiller – UC Davis Communications Chief Guru has responded with clarifications that this policy is NOT intended to suppress any communications but is about coordination with the News Service

I’m replying directly and publicly as an expression of transparency, and professional respect for you.

You indeed misinterpret the policy. It was, and is, intended to optimize coordination with the media – not, as is inferred by your post, to inhibit anyone. Coordination, by the way, is as beneficial to the media as anyone. They appreciate knowing their go-to points of contact. That said, reporters contact faculty, staff and students without interference or inhibition. All the time. 

It may be that this policy fails to clarify or contemporize the distinction between “reporters” and social media content creators, including bloggers. If so, we will take a look at it; I’d welcome your input. 

But let me be clear: as you well know, many university constituents actively blog, tweet, post, opine. (I’m among them.) In this age, it is an important ingredient in telling our story. The policy is not intended to discourage that


Good morning to my Twitter SPAM followers – is Twitter even trying to stop this?

Here are some of my SPAM followers from this morning … again … all pointing to blog.livedoor.jp addresses.  Twitter still does not seem willing or able to do anything about this.  Annoying.

I and others have written about this extensively and still no response or action from Twitter.

Twitter seems to have lost complete control of some spam

Aaarrrrggg … this is driving me crazy.  For over a month now I have been seeing 10-20-30 or more new followers a day on Twitter that are some sort of SPAM.

For example, a few minutes ago I looked at my most recent followers:

And when I look at them in more detail I see many of them are simply posting links to some SPAMMY sites at the domain “blog.livedoor.jp”.  For example

and

and many many many many more.  They are all like this with links to some spammy site at blog.livedoor.jp.  It is so easy to identify these … but it is a pain.  Why can’t Twitter get a handle on this?   I mark them as SPAM – day after day after day.  And more come. Uggh.

Huffington Post picks me & two members of lab as top biologists/chemists to follow on Twitter

From here.

Good press for my lab here: Scientists On Twitter: 30 Biologists And Chemists To Follow

The list (which started out at 30 and expanded to 47) included three people from my lab: me (@phylogenomics), post doc Holly Bik (@dr_bik) and PhD student Russell Neches (@ryneches).

I like that I am the first one shown on the slideshow (though not sure if this means I am #1 on their list or just random …).

Making such lists is always a challenge and also rife with issues.  There are many many great tweeters of chemistry and biology not on the list, for example. But I think they did a pretty good job covering diverse types of people here.  Lots of women too, which was good to see.

Anyway – thanks to Rebecca Searles and her advisor Jason Goldman for compiling the list and making my lab look pretty good …

Full list:

  1. @phylogenomics
  2. @NerdyChristie
  3. @nparmalee
  4. @biochembelle
  5. @kejames
  6. @DrBondar
  7. @kzelnio
  8. @girlscientist
  9. @MiriamGoldste
  10. @modernscientist
  11. @PolymerPhD
  12. @toraks
  13. @RichardDawkins
  14. @nuin
  15. @DrRubidium
  16. @mitpostdoc
  17. @Evolutionistrue
  18. @ChemicalBiology
  19. @WhySharksMatter
  20. @Aur_ora
  21. @ChemistPD
  22. @dgmacarthur
  23. @DNLee5
  24. @aetiology
  25. @Myrmecos
  26. @thisischristina
  27. @deborahblum
  28. @SeeArrOh
  29. @carmendrahl
  30. @Dr_Bik
  31. @TCNoel
  32. @nssampson
  33. @sciencegeist
  34. @SFriedScientist
  35. @kg_science
  36. @JATetro
  37. @JacquelynGill
  38. @Katie_PhD
  39. @D_Aldridge
  40. @JohnFBruno
  41. @ScientistMags
  42. @jtotheizzoe
  43. @MayaPlass
  44. @scimomof2
  45. @DrTwittenheimer
  46. @leonidkruglyak
  47. @ryneches

Some general tips for how to keep up w/ American Society for Microbiology Mtg #ASM2011

https://picasaweb.google.com/s/c/bin/slideshow.swf

Well, I have arrived in New Orleans for the ASM General Meeting 2011.  Some quick notes here about how people might keep up with whats going on:

Watch this or other real time streams of twitter posts

http://widgets.twimg.com/j/2/widget.js
new TWTR.Widget({ version: 2, type: ‘search’, search: ‘#asm2011’, interval: 6000, title: ‘American Society for Microbiology General Meeting 2011’, subject: ‘#ASM2011 Twitter Stream’, width: 250, height: 300, theme: { shell: { background: ‘#8ec1da’, color: ‘#ffffff’ }, tweets: { background: ‘#ffffff’, color: ‘#444444’, links: ‘#1985b5’ } }, features: { scrollbar: true, loop: true, live: true, hashtags: true, timestamp: true, avatars: true, toptweets: true, behavior: ‘default’ } }).render().start();
Follow just my posts about the Meeting:

http://widgets.twimg.com/j/2/widget.js
new TWTR.Widget({ version: 2, type: ‘search’, search: ‘#asm2011 from:phylogenomics’, interval: 6000, title: ”, subject: ‘Jonathan Eisen at ASM2011’, width: 250, height: 300, theme: { shell: { background: ‘#8ec1da’, color: ‘#ffffff’ }, tweets: { background: ‘#ffffff’, color: ‘#444444’, links: ‘#1985b5’ } }, features: { scrollbar: true, loop: true, live: true, hashtags: true, timestamp: true, avatars: true, toptweets: true, behavior: ‘default’ } }).render().start();

Read up on some of my past reports from ASM meetings

Alternative Real Time Twitter Feed for #AGBT #Experiment

http://widgets.twimg.com/j/2/widget.js
new TWTR.Widget({ version: 2, type: ‘search’, search: ‘#AGBT’, interval: 6000, title: ‘Marco Island AGBT Meeting tweets’, subject: ‘Genomics Live’, width: 250, height: 300, theme: { shell: { background: ‘#8ec1da’, color: ‘#ffffff’ }, tweets: { background: ‘#ffffff’, color: ‘#444444’, links: ‘#1985b5’ } }, features: { scrollbar: true, loop: false, live: false, hashtags: true, timestamp: true, avatars: true, toptweets: true, behavior: ‘all’ } }).render().start();

Tracking Advances in Genome Biology & Technology meeting w/ Twitter Widget: #AGBT

Just a little experiment here seeing if this twitter widget tracks #AGBT tweets in real time …

http://widgets.twimg.com/j/2/widget.js
new TWTR.Widget({ version: 2, type: ‘search’, search: ‘#AGBT’, interval: 6000, title: ‘AGBT Meeting’, subject: ‘Genomics Live’, width: 250, height: 300, theme: { shell: { background: ‘#8ec1da’, color: ‘#ffffff’ }, tweets: { background: ‘#ffffff’, color: ‘#444444’, links: ‘#1985b5’ } }, features: { scrollbar: false, loop: true, live: true, hashtags: true, timestamp: true, avatars: true, toptweets: true, behavior: ‘default’ } }).render().start();